Papers about DArT

Papers about DArT

Hanna Bolibok-Bragoszewska, Katarzyna Heller-Uszynska, Peter Wenzl, Grzegorz Uszynski, Andrzej Kilian and Monika Rakoczy-Trojanowska (2009), DArT markers for the rye genome - genetic diversity and mapping. BMC Genomics, 10:578
Aurelie Bonin, Margot Paris, Guillaume Tetreau, Jean-Philippe David, Laurence Despres (2009), Candidate genes revealed by a genome scan for mosquito resistance to a bacterial insecticide: sequence and gene expression variations. BMC Genomics, 10:551 doi:10.1186/1471-2164-10-551
Sanwen Huang et al. (2009), The genome of the cucumber, Cucumis sativus L. Nature Genetics, published online: 1 November 2009, doi:10.1038/ng.475
David Kopecky, Jan Bartos, Adam J. Lukaszewski, James H. Baird, Vladimir Cernoch, Roland Kolliker, Odd Arne Rognli, Helene Blois, Vanessa Caig, Thomas Lubberstedt, Bruno Studer, Paul Shaw, Jaroslav Dolezel and Andrzej Kilian (2009), Development and mapping of DArT markers within the Festuca - Lolium complex. BMC Genomics, 10, 473
Ange-MarieRisterucci, Isabelle Hippolyte, Xavier Perrier, Ling Xia, Vanessa Caig, Margaret Evers, Eric Huttner, Andrzej Kilian and Jean-Christophe Glaszmann, (2009) Development and assessment of Diversity Arrays Technology for high-throughput DNA analyses in Musa. Theoretical and Applied Genetics, 119, 1093-1103
Singh PK, Mergoum M, Adhikari TB, Shah T, Ghavami F and Kianian SF, (2009) Genetic and molecular analysis of wheat tan spot resistance effective against Pyrenophora tritici-repentis races 2 and 5. Molecular Breeding published online 27 September 2009.
Hai-Chun Jing, Carlos Bayon, Kostya Kanyuka, Simon Berry, Peter Wenzl, Eric Huttner, Andrzej Kilian and Kim Hammond-Kosack, (2009) DArT markers: diversity analyses, genomes comparison, mapping and integration with SSR markers in Triticum monococcum. BMC Genomics 2009, 10:458
Nicholas A Tinker, Andrzej Kilian, Charlene P Wight, Katarzyna Heller-Uszynska, Peter Wenzl, Howard W Rines, Asmund Bjornstad, Catherine J Howarth, Jean-Luc Jannink, Joseph M Anderson, Brian G Rossnagel, Deon D Stuthman, Mark E Sorrells, Eric W Jackson, Stine Tuvesson, Frederic L Kolb, Olof Olsson, Luiz Carlos Federizzi, Marty L Carson, Herbert H Ohm, Stephen J Molnar, Graham J Scoles, Peter E Eckstein, J. Michael Bonman, Alf Ceplitis and Tim Langdon, (2009) New DArT markers for oat provide enhanced map coverage and global germplasm characterization. BMC Genomics 2009, 10:39
Mace ES, Rami JF, Bouchet S, Klein PE, Klein RR, Kilian A, Wenzl P, Xia L, Halloran K, Jordan DR. (2009) A consensus genetic map of sorghum that integrates multiple component maps and high-throughput Diversity Array Technology (DArT) markers. BMC Plant Biology 2009, 9:13
Aurélie Bonin, Margot Paris, Laurence Després, Guillaume Tetreau, Jean-Philippe David and Andrzej Kilian (2008) A MITE-based genotyping method to reveal hundreds of DNA polymorphisms in an animal genome after a few generations of artificial selection, BMC Genomics, 9:459
Bedo J, Wenzl P, Kowalczyk A, Kilian A. (2008) Precision-mapping and statistical validation of quantitative trait loci by machine learning. BMC Genetics 9: 35
James KE, Schneider H, Ansell SW, Evers M, Robba L, Uszynski G, Pedersen N, Newton AE, Russel SJ, Vogel JC, Kilian A (2008) Diversity Arrays Technology (DArT) for pan-genomic evolutionary studies of non-model organisms. PLoS ONE 3: e1682
Mace ES, Xia L, Jordan DR, Halloran K, Parh DK, Huttner E, Wenzl P, Kilian A (2008) DArT markers: diversity analyses and mapping in Sorghum bicolor. BMC Genomics 9: 26
Mantovani P, Maccaferri M, Sanguineti MC, Tuberosa R, Catizone I, Wenzl P, Thomson B, Carling J, Huttner E, DeAmbrogio E, Kilian A. (2008) An integrated DArT-SSR linkage map of durum wheat. Molecular Breeding, 22, 4, 629-648.
Peleg Z, Saranga Y, Suprunova T, Ronin Y, Röder MS, Kilian A, Korol AB, Fahima T (2008) High-density genetic map of durum wheat x wild emmer wheat based on SSR and DArT markers. Theor Appl Genet 117: 103-115
White J, Law JR, MacKay I, Chalmers KJ, Smith JS, Kilian A, Powell W (2008) The genetic diversity of UK, US and Australian cultivars of Triticum aestivum measured by DArT markers and considered by genome. Theor Appl Genet 116: 439-453
Etienne Paux, Pierre Sourdille, Jérôme Salse, Cyrille Saintenac, Frédéric Choulet, Philippe Leroy, Abraham Korol, Monika Michalak, Shahryar Kianian, Wolfgang Spielmeyer, Evans Lagudah, Daryl Somers, Andrzej Kilian, Michael Alaux, Sonia Vautrin, Hélène Bergès, Kellye Eversole, Rudi Appels, Jan Safar, Hana Simkova, Jaroslav Dolezel, Michel Bernard, and Catherine Feuillet (2008) A Physical Map of the 1-Gigabase Bread Wheat Chromosome 3B. Science 322 (5898), 101.[DOI: 10.1126/science.1161847]
Badea A, Eudes F, Graf RJ, Laroche A, Gaudet DA, Sadasivaiah RS (2008) Phenotypic and marker-assisted evaluation of spring and winter wheat germplasm for resistance to fusarium head blight. Euphytica 164: 803-819
Grewal TS, Rossnagel BG, Pozniak CJ, Scoles GJ (2008) Mapping quantitative trait loci associated with barley net blotch resistance. Theor Appl Genet 116: 529-539
Huynh BL, Wallwork H, Stangoulis JCR, Graham RD, Willsmore KL, Olson St, Mather DE (2008) Quantitative trait loci for grain fructan concentration in wheat (Triticum aestivum L.). Theor Appl Genet117: 701-709
Li H, Vaillancourt R, Mendham N, Zhou M (2008) Comparative mapping of quantitative trait loci associated with waterlogging tolerance in barley (Hordeum vulgare L.). BMC Genomics 9: 401
Lillemo M, Asalf B, Singh RP, Huerta-Espino J, Chen XM, He ZH, Bjørnstad A (2008) The adult plant rust resistance loci Lr34/Yr18 and Lr46/Yr29 are important determinants of partial resistance to powdery mildew in bread wheat line Saar. Theor Appl Genet, 116, 8, 1155-1166.
Parh DK, Jordan DR, Aitken EAB, Mace ES, Jun-ai P, McIntyre CL, Godwin ID (2008) QTL analysis of ergot resistance in sorghum. Theor Appl Genet 117: 369-382
Bariana HS, Brown GN, BAnsal UK, Miah H, Standen GE, Lu M (2007) Breeding triple rust resistant wheat cultivars for Australia using conventional and marker-assisted selection technologies. Aust J Agric Res 58: 576-587
Crossa J, Burgueño J, Dreisigacker S, Vargas M, Herrera-Foessel SA, Lillemo M, Singh RP, Trethowan R, Warburton M, Franco J, Reynolds M, Crouch JH, Ortiz R (2007) Association analysis of historical bread wheat germplasm using additive genetic covariance of relatives and population structure. Genetics 177: 1889-1913
Gupta PK, Rustgi S, Mir RR (2008) Array-based high-throughput DNA markers for crop improvement. Heredity 101: 5-18
Hearnden PR, Eckermann PJ, McMichael GL, Hayden MJ, Eglinton JK, Chalmers KJ (2007) A genetic map of 1,000 SSR and DArT markers in a wide barley cross. Theor Appl Genet 115: 383-39
Pozniak CJ, Knox RE, Clarke FR, Clarke JM (2007) Identification of QTL and association of a phytoene synthase gene with endosperm colour in durum wheat. Theor Appl Genet 114: 525-537
Wenzl P, Raman H, Wang J, Zhou M, Huttner E, Kilian A (2007) A DArT platform for quantitative bulked segregant analysis. BMC Genomics 8: 196.
Akbari M, Wenzl P, Vanessa C, Carling J, Xia L, Yang S, Uszynski G, Mohler V, Lehmensiek A, Kuchel H, Hayden MJ, Howes N, Sharp P, Rathmell B, Vaughan P, Huttner E, Kilian A (2006) Diversity Arrays Technology (DArT) for high-throughput profiling of the hexaploid wheat genome. Theoretical and Applied Genetics. 113: 1409-1420
Wenzl P, Li H, Carling J, Zhou M, Raman H, Paul E, Hearnden P, Maier C, Xia L, Caig V, Ovesna J, Cakir M, Poulsen D, Wang J, Raman R, Smith KP, Muehlbauer GJ, Chalmers KJ, Kleinhofs A, Huttner E, Kilian A (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and phenotypic traits. BMC Genomics 7, 206.
Semagn K., Bjornstad A., Skinnes H., Maroy AG., Tarkegne Y., William M., (2006) Distribution of DArT, AFLP, and SSR markers in a genetic linkage map of a doubled-haploid hexaploid wheat population. Genome 49: 545-55
Sessitsch A, Hackl E, Wenzl P, Kilian A, Kostic T, Stralis-Pavese N, Tankouo Sandjong B, Bodrossy L (2006) Diagnostic microbial microarrays in soil ecology. New Phytologist 171, 719-736
Yang S, Pang W, Ash G, Harper J, Carling J, Wenzl P, Huttner E, Kilian A (2006) Low level of genetic diversity in cultivated pigeonpea compared to its wild relatives is revealed by Diversity Arrays Technology (DArT) Theoretical and Applied Genetics 113, 585-595.
Xie Y, McNally K, Li CY, Leung H, Zhu YY (2006) A high-throughput genomic tool: diversity array technology complementary for rice genotyping. Journal of Integrative Plant Biology 48, 1069-1076.
Kilian A, Huttner E, Wenzl P, Jaccoud D, Carling J, Caig V, Evers M, Heller-Uszynska K, Cayla C, Patarapuwadol S, Xia L, Yang S, Thomson B (2005) The fast and the cheap: SNP and DArT-based whole genome profiling for crop improvement. In Tuberosa R, Phillips RL, Gale M (eds) Proceedings of the International Congress In the Wake of the Double Helix: From the Green Revolution to the Gene Revolution, May 27-31, 2003, Bologna, Italy. Avenue Media, pp 443-461.
Wittenberg AHJ, van der Lee T, Cayla C, Kilian A, Visser RGF, Schouten HJ (2005) Validation of the high-throughput marker technology DArT using the model plant Arabidopsis thaliana. Molecular Genetics and Genomics. 274: 30-39.
Xia L, Peng K, Yang S, Wenzl P, de Vicente C, Fregene M, Kilian A (2005) DArT for high-throughput genotyping of cassava (Manihot esculenta) and its wild relatives. Theoretical and Applied Genetics. 110: 1092-1098.
Lezar S, Myburg AA, Berger DK, Wingfield MJ, Wingfield BD (2004) Development and assessment of microarray-based DNA fingerprinting in Eucalyptus grandis. Theoretical and Applied Genetics 109: 1329-1336.
Wenzl P, Carling J, Kudrna D, Jaccoud D, Huttner E, Kleinhofs A, Kilian A (2004) Diversity arrays technology (DArT) for whole-genome profiling of barley. Proceedings of the National Academy of Sciences of the USA 101: 9915-9920.
Luikart et al. (2003) Molecular markers for population genomics and genome typing. Nature Rev Genet 4: 981
Jaccoud D, Peng K, Feinstein D, Kilian A (2001) Diversity Arrays: a solid state technology for sequence information independent genotyping. Nucleic Acids Research 29: e25.

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